Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAATTGTAGTTGTGAA
(((((((((((((((......&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253852
GeneSymbolAP4B1
Binding site599,615
Score0.923
Seed1
Au0.544
Energy-17.4
Binding len16
Me-4.171
Phylopstem0.37443407333333334
Phylopflank0.24077587
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure