Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCCCGGCTGTGAA
(((((((((.(((.....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253852
GeneSymbolAP4B1
Binding site1345,1363
Score0.846
Seed1
Au0.485
Energy-17.4
Binding len18
Me-7.005
Phylopstem0.7570706222222222
Phylopflank1.735591195
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure