Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAAGATCATATTAAGGCTGCAGCTGCT
..((((((((((((.(((...&.))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253855
GeneSymbolSPAG6
Binding site1242,1273
Score0.923
Seed1
Au0.515
Energy-22.8
Binding len18
Me-5.692
Phylopstem4.911511583333334
Phylopflank4.261809125000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure