Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCATCCTCGCTCGGGACTGTGCGGCTGCGGCGGCT
..((.((((((((((((.(((&.))).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253884
GeneSymbolALPK1
Binding site334,373
Score0.923
Seed0
Au0.368
Energy-24.0
Binding len21
Me-9.076
Phylopstem2.2274842500000003
Phylopflank1.487888235
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure