Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAACCTGATGACTTTGAAAAGCTGTT
..((((((..(((((((((((&)))))))))))..............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253884
GeneSymbolALPK1
Binding site2965,2997
Score0.923
Seed1
Au0.485
Energy-22.4
Binding len32
Me-7.256
Phylopstem0.34774781818181816
Phylopflank1.4935094775000002
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure