Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATATTGTTGCTCAGGA
.(((((((.(((((((......&)))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001253901
GeneSymbolMEST
Binding site643,659
Score0.846
Seed1
Au0.574
Energy-15.5
Binding len16
Me-4.85
Phylopstem4.917584285714285
Phylopflank3.90053101875
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure