Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCACTTCCCCATCGAATGCCAGGA
.((((((((.(.(((..((...&.))..))).).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001253912
GeneSymbolTBC1D1
Binding site2148,2175
Score0.846
Seed1
Au0.368
Energy-16.9
Binding len20
Me-8.616
Phylopstem1.425070975
Phylopflank1.6433384325000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure