Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAACAAGCAAAATGCTGCT
..((((((((.((((.(((((&)))))))))..)))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001253914
GeneSymbolTBC1D1
Binding site2380,2404
Score0.846
Seed1
Au0.471
Energy-20.5
Binding len24
Me-8.015
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure