Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGCGCGGCTGGAGT
((.((((((((.((((.....&)))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254
GeneSymbolCDC6
Binding site13,30
Score0.808
Seed0
Au0.407
Energy-21.7
Binding len17
Me-8.842
Phylopstem-0.20030175
Phylopflank-0.313616015
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end3
Position5UTR
2D Structure