Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACAGTTTGTTTCCACACTGTGGGCAGCTGCT
..((((((((..(((((((((&)))))))))..................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254
GeneSymbolCDC6
Binding site3760,3796
Score0.923
Seed1
Au0.5
Energy-21.5
Binding len36
Me-11.129
Phylopstem2.580221333333333
Phylopflank2.691813667499999
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure