Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGGACTGCCCAGGCTGTAT
.(((((((((((((.(((((.&)))))..))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254
GeneSymbolCDC6
Binding site928,952
Score0.923
Seed1
Au0.5
Energy-21.4
Binding len24
Me-4.529
Phylopstem2.8450984750000003
Phylopflank1.8661574774999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure