Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTTTGGAGCAGCTGCTGGCGCTCTATGTGGCAGAGATCCGGCGGCTGCAGG
((((((((((((((((.....&.))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254717
GeneSymbolDAXX
Binding site457,510
Score1.0
Seed1
Au0.456
Energy-20.6
Binding len45
Me-3.938
Phylopstem0.47410362325581423
Phylopflank0.4244880875000001
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end3
PositionCDS
2D Structure