Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACAACCAGTCTTCCTGGAGGGGCAGCAACAGGTGGGCTCTCCTTCTGCAGA
((((((((((((((((.(((.&)))..))))))...............)))))...................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254718
GeneSymbolMYBPC1
Binding site3535,3591
Score0.821
Seed1
Au0.412
Energy-18.0
Binding len56
Me-3.938
Phylopstem4.49645432284
Phylopflank4.098964134999999
Longest consecutive pairings6
Position of longest consecutive pairings45
Pairings in 3prime end6
PositionCDS
2D Structure