Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTGAATAGCCAGGG
.((((((.((....((((((..&))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001254726
GeneSymbolAP4S1
Binding site609,628
Score0.846
Seed1
Au0.412
Energy-17.6
Binding len19
Me-14.425
Phylopstem4.764419333333334
Phylopflank4.46783016
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure