Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGGACTGAGGCTGCAGT
((((((((.(((((.(.((((&))))..).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254727
GeneSymbolAP4S1
Binding site1623,1646
Score1.0
Seed1
Au0.441
Energy-23.3
Binding len23
Me-5.729
Phylopstem0.186198875
Phylopflank0.09298027750000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure