Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTACAAGTACTTTGAGACCTGAGCATGCCGGGA
.((((((((((..((((((((.&)))))))).)))................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001254732
GeneSymbolSPECC1L
Binding site3402,3438
Score0.846
Seed1
Au0.382
Energy-18.8
Binding len36
Me-8.429
Phylopstem4.189329923076923
Phylopflank2.24585865
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end7
PositionCDS
2D Structure