Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGACCCCAACTCAGGCTGGGGAGGAGCCCCTGAATGTGGGCAGTGT
(((((((((((((((((((...&.))))...........))))))))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363536
GeneSymbolHARS2
Binding site1199,1249
Score0.846
Seed1
Au0.353
Energy-23.1
Binding len45
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end5
PositionCDS
2D Structure