Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCAAAGAAGCAATTGCAGCTT
....((((((((((((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254736
GeneSymbolNABP1
Binding site1638,1660
Score0.923
Seed0
Au0.721
Energy-18.4
Binding len14
Me-9.547
Phylopstem0.5086201
Phylopflank0.53482377
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure