Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTGCACCCGGGGCTGCAAA
((((((((.(((.(((((.(.&).))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254751
GeneSymbolCD6
Binding site2904,2925
Score0.846
Seed1
Au0.353
Energy-25.5
Binding len21
Me-6.283
Phylopstem-0.6118130374999999
Phylopflank-0.4626287262500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure