Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGACCCCCAATTGCCAGCTGTGGT
(((((((((((((((...(((&.)))..))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254752
GeneSymbolUQCRB
Binding site3502,3532
Score0.846
Seed1
Au0.485
Energy-19.2
Binding len23
Me-4.171
Phylopstem0.3272624526875
Phylopflank0.2770277176875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure