Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCAGCCGCTGAGATGCTGACAC
.((((((.(((((((..((((&))))..)))))))......)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001254756
GeneSymbolCYB5D2
Binding site215,242
Score1.0
Seed1
Au0.529
Energy-21.6
Binding len27
Me-6.34
Phylopstem0.9620395000000002
Phylopflank3.409625858749999
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
Position5UTR
2D Structure