Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACGAAGGTGGCAGCTGACAGA
((((((((((.((((((((((&)))))))))...).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001255976
GeneSymbolPMEPA1
Binding site2958,2984
Score1.0
Seed1
Au0.441
Energy-22.7
Binding len26
Me-6.762
Phylopstem0.6072271776923077
Phylopflank0.9205559271250001
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure