Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGTAACCGTAGCAAAACTGCAT
.(((((((((((((((((...&))))))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256014
GeneSymbolPSMC3IP
Binding site1388,1411
Score0.846
Seed1
Au0.765
Energy-19.0
Binding len23
Me-3.793
Phylopstem1.2683919545454545
Phylopflank0.15683938214285711
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure