Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCCCTTGCTGCT
..(((((...((..((((((.&)))))).))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256023
GeneSymbolCLIC5
Binding site1600,1618
Score0.846
Seed0
Au0.441
Energy-18.1
Binding len18
Me-11.716
Phylopstem6.534383333333333
Phylopflank5.4663700725
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure