Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATGCCCACAGGCAGAGCACACAGGCAGCCGAGTGGCCGCAGCCCTGCAGT
(((((((((((((((...(((&.)))...))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256026
GeneSymbolARHGAP22
Binding site12,67
Score0.897
Seed1
Au0.338
Energy-24.2
Binding len25
Me-4.171
Phylopstem0.5662442235294117
Phylopflank0.05684604861111109
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure