Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCAGAGATGGCAGTTGCT
..((((((((.((((((.(((&))).))))...)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256041
GeneSymbolMYO1A
Binding site3862,3885
Score0.846
Seed1
Au0.412
Energy-21.3
Binding len23
Me-7.782
Phylopstem0.30772292500000004
Phylopflank0.23911321637499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure