Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATGGCTGTTTAGCAACAGG
(((..((((((((((((((((&)))))))))))))..)))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256045
GeneSymbolPIK3CB
Binding site1392,1416
Score0.923
Seed0
Au0.515
Energy-19.2
Binding len24
Me-11.089
Phylopstem2.515493766666667
Phylopflank1.3465533460000003
Longest consecutive pairings13
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure