Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTGCTGCCCGGTTGCT
..(((((((.(((.(((.((.&)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256054
GeneSymbolC9orf72
Binding site93,111
Score0.872
Seed1
Au0.368
Energy-19.6
Binding len18
Me-7.056
Phylopstem0.14885822857142855
Phylopflank1.817120385
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure