Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCAGCTCACACTTGCAAACCTGTGGCTGTT
..(((((((((((((((((((&.)).))))))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256054
GeneSymbolC9orf72
Binding site868,902
Score0.846
Seed1
Au0.515
Energy-21.6
Binding len24
Me-4.957
Phylopstem0.7540436636363637
Phylopflank0.8191594099999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure