Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCTGAGTTAGAAGATGAGGAGAGGCAGCAGGGAT
((.(.((((((((((((((((&)))))))))))....................))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256062
GeneSymbolTHTPA
Binding site1568,1610
Score0.923
Seed0
Au0.5
Energy-21.7
Binding len42
Me-9.614
Phylopstem2.27539
Phylopflank1.95228754375
Longest consecutive pairings11
Position of longest consecutive pairings31
Pairings in 3prime end8
Position3UTR
2D Structure