Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATAACTGTTGCTGTAT
.((((((.(((((((((....&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256064
GeneSymbolCNTN1
Binding site37,54
Score0.846
Seed1
Au0.632
Energy-19.3
Binding len17
Me-6.107
Phylopstem2.775528
Phylopflank2.6806991785185184
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position5UTR
2D Structure