Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGAACAGCTGCTGCGGCTGCAC
.((((((((((((.((.....&.)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256071
GeneSymbolRNF213
Binding site15417,15441
Score0.923
Seed1
Au0.5
Energy-24.0
Binding len17
Me-4.65
Phylopstem3.631529916666666
Phylopflank2.53961551125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure