Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCGACCGCAGTC
.....((((((((((..((((&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256090
GeneSymbolATF2
Binding site1257,1272
Score0.923
Seed0
Au0.5
Energy-18.0
Binding len15
Me-13.899
Phylopstem2.5166446999999996
Phylopflank2.04240991275
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure