Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCGACCGCAGTC
.....((((((((((..((((&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256092
GeneSymbolATF2
Binding site1125,1140
Score0.923
Seed0
Au0.5
Energy-18.0
Binding len15
Me-13.899
Phylopstem3.4651173999999996
Phylopflank4.049444736750001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure