Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGCAAGTCCGCGCTGCT
..(((((.((((((((.((((&))))...))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256095
GeneSymbolMYH10
Binding site5290,5313
Score0.846
Seed0
Au0.368
Energy-21.7
Binding len23
Me-7.271
Phylopstem5.854811699999998
Phylopflank5.1170816089999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure