Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGACGACTCACTGCGGCTGCGC
.((((((((((((.((.....&.))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256109
GeneSymbolCD101
Binding site3317,3342
Score0.923
Seed1
Au0.353
Energy-21.7
Binding len18
Me-4.65
Phylopstem-0.08069024999999998
Phylopflank0.011165437499999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure