Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGGCTGCAGTTGCC
..((((((((((((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256113
GeneSymbolTDRP
Binding site1788,1803
Score0.846
Seed1
Au0.397
Energy-20.7
Binding len15
Me-4.957
Phylopstem2.215364857142857
Phylopflank1.63370843125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure