Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACGTGCCCCAAGATGGAACGATGTTAACTGCGCTGCAT
.((((((.(((((((......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256114
GeneSymbolLHX8
Binding site1488,1530
Score1.0
Seed1
Au0.544
Energy-19.0
Binding len15
Me-6.34
Phylopstem3.3039688571428565
Phylopflank3.8228176650000005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure