Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGTACAGCCTGGGACCAGTAGCTGA
...(((((((((((.(.((((&.))))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256121
GeneSymbolS100PBP
Binding site576,603
Score0.923
Seed0
Au0.515
Energy-21.4
Binding len20
Me-7.25
Phylopstem0.907708
Phylopflank0.9626196974999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure