Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCCTACTTCTGCTGGGCTGCAT
.(((((((((((..(((.(((&))).)))..))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256126
GeneSymbolCERS6
Binding site4486,4509
Score0.846
Seed1
Au0.544
Energy-20.3
Binding len23
Me-5.939
Phylopstem0.15385276153846153
Phylopflank0.19533732374999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure