Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGGCTGCAGTTGGGGA
((.(((((((((((.(.((((&))))).))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256127
GeneSymbolNSUN4
Binding site2098,2119
Score0.923
Seed0
Au0.529
Energy-22.4
Binding len21
Me-6.231
Phylopstem0.5126342363636365
Phylopflank0.6825962175000002
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure