Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGGAAAGGATTCAGCCCCTTCCTCAACCTCGAGCTGCC
..(((((((.(((((.((((.&.))))...))))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256127
GeneSymbolNSUN4
Binding site209,254
Score0.846
Seed1
Au0.382
Energy-20.9
Binding len23
Me-6.433
Phylopstem0.9552070000000001
Phylopflank0.6885850450000002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure