Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAACAATGCCACTCTCTTTACAGCTGCAGA
......((((((((((((((.&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256135
GeneSymbolCSE1L
Binding site1556,1589
Score0.821
Seed0
Au0.515
Energy-21.3
Binding len16
Me-15.567
Phylopstem5.476341071428572
Phylopflank4.613438867499999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure