Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAGTGCTGCAGCTGACAAA
((((((((((((((((.....&)))...)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256135
GeneSymbolCSE1L
Binding site2112,2133
Score0.923
Seed1
Au0.544
Energy-20.6
Binding len21
Me-3.938
Phylopstem4.742706765
Phylopflank4.586921012499999
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure