Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACAGCTGACAAGGCAAATGCCCAGGCCGCAGCTCTGTAT
.(((((((((((((....(((&.)))..))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256140
GeneSymbolCAPG
Binding site730,774
Score1.0
Seed1
Au0.471
Energy-20.8
Binding len22
Me-4.762
Phylopstem3.5192892666666675
Phylopflank3.843410221249999
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure