Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAGTTTCAGCATGCT
..(((((((.(((((((((((&))))))))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256141
GeneSymbolFSBP
Binding site3563,3584
Score0.846
Seed1
Au0.735
Energy-18.0
Binding len21
Me-6.2
Phylopstem-0.1295134272727273
Phylopflank0.32343514249999994
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure