Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAGCTGAAGGCTGCAT
.(((((((.(((((.(.....&).)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256141
GeneSymbolFSBP
Binding site20,37
Score0.846
Seed1
Au0.561
Energy-17.0
Binding len17
Me-5.585
Phylopstem0.698821857142857
Phylopflank0.4192368726184211
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure