Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATTGCTGCGGCTGG
...((((((((((.(((....&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256160
GeneSymbolATF7IP2
Binding site31,46
Score0.846
Seed0
Au0.382
Energy-18.9
Binding len15
Me-7.371
Phylopstem-0.47805
Phylopflank-0.33321681249999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure