Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTAACTTCATCTAAGTCCCCAGATGGGTACAATGGGAGCTGA
...(((((.(.((((((....&.)))))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256169
GeneSymbolAPOM
Binding site600,646
Score0.923
Seed0
Au0.485
Energy-17.9
Binding len16
Me-10.396
Phylopstem0.9930629999999999
Phylopflank0.6644190525
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure