Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAATTGTGGCTGTGAC
(((((((((((((((((....&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256214
GeneSymbolATP1A3
Binding site2289,2307
Score0.846
Seed1
Au0.368
Energy-21.4
Binding len18
Me-3.938
Phylopstem5.754456476470589
Phylopflank6.0161895250000015
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure